Journal: Frontiers in Microbiology

Article Title: Emergence of Multidrug-Resistant Salmonella enterica Subspecies enterica Serovar Infantis of Multilocus Sequence Type 2283 in German Broiler Farms

doi: 10.3389/fmicb.2020.01741

Figure Lengend Snippet: Epidemiological data and phenotypic AMR profile of S. Infantis strains used in this study.

Article Snippet: S . Infantis strains were provided by the National Reference Laboratory for Salmonella at the German Federal Institute for Risk Assessment (BfR) or were received after request from regional diagnostic laboratories in different federal states in Germany.

Techniques:

Journal: Frontiers in Microbiology

Article Title: Emergence of Multidrug-Resistant Salmonella enterica Subspecies enterica Serovar Infantis of Multilocus Sequence Type 2283 in German Broiler Farms

doi: 10.3389/fmicb.2020.01741

Figure Lengend Snippet: Sequence type (ST), resistance genes (ESIr pattern and other) and plasmid replicons detected in broiler-derived S . Infantis strains from Germany and comparison with the complete genome sequence of plasmid pESI detected in S . Infantis SI119944 strain from Israel.

Article Snippet: S . Infantis strains were provided by the National Reference Laboratory for Salmonella at the German Federal Institute for Risk Assessment (BfR) or were received after request from regional diagnostic laboratories in different federal states in Germany.

Techniques: Sequencing, Plasmid Preparation, Comparison

Journal: Frontiers in Microbiology

Article Title: Emergence of Multidrug-Resistant Salmonella enterica Subspecies enterica Serovar Infantis of Multilocus Sequence Type 2283 in German Broiler Farms

doi: 10.3389/fmicb.2020.01741

Figure Lengend Snippet: (A,B) Phylogeny of broiler-derived S . Infantis strains in Germany and S . Infantis SI119944 from Israel. (A) Phylogenetic tree based on SNPs representing two main decade- and ST-related groups as the minimum spanning tree based on cgMLST. (B) Plasmid pESI-like is presented in the majority of samples from the 2010s ( n = 15) and absent for the data from the 1990s. Samples 3227 and 3230 that belong to ST1032 are grouped within the 1990s group as they do not present the plasmid pESI-like. Note that samples 2748 and 3027 belong to ST32 but they are grouped with the samples collected in the 2010s (B) and that three strains from the 2010s are included within the group of the 1990s as they have ST32 (marked in red in B ).

Article Snippet: S . Infantis strains were provided by the National Reference Laboratory for Salmonella at the German Federal Institute for Risk Assessment (BfR) or were received after request from regional diagnostic laboratories in different federal states in Germany.

Techniques: Derivative Assay, Plasmid Preparation

Journal: Frontiers in Microbiology

Article Title: Emergence of Multidrug-Resistant Salmonella enterica Subspecies enterica Serovar Infantis of Multilocus Sequence Type 2283 in German Broiler Farms

doi: 10.3389/fmicb.2020.01741

Figure Lengend Snippet: Virulence and fitness genes detected in broiler-derived S . Infantis strains from Germany (ESIv pattern) and comparison with the complete genome sequence of plasmid pESI detected in S. Infantis SI119944 strain from Israel.

Article Snippet: S . Infantis strains were provided by the National Reference Laboratory for Salmonella at the German Federal Institute for Risk Assessment (BfR) or were received after request from regional diagnostic laboratories in different federal states in Germany.

Techniques: Comparison, Sequencing, Plasmid Preparation

Journal: EFSA Journal

Article Title: The European Union One Health 2018 Zoonoses Report

doi: 10.2903/j.efsa.2019.5926

Figure Lengend Snippet: Salmonella National Control Programmes in place in the poultry populations, targets to reach and reference legislation, EU

Article Snippet: However, in 2018, for the first time, S . Infantis was the second serovar isolate from breeding Gallus gallus in the context of NCP, although this finding was markedly related to the situation of a single MS.

Techniques: Control, Variant Assay

Journal: EFSA Journal

Article Title: The European Union One Health 2018 Zoonoses Report

doi: 10.2903/j.efsa.2019.5926

Figure Lengend Snippet: Distribution of reported confirmed cases of human salmonellosis in the EU/EEA, 2016–2018, by the 20 most frequent serovars in 2018

Article Snippet: However, in 2018, for the first time, S . Infantis was the second serovar isolate from breeding Gallus gallus in the context of NCP, although this finding was markedly related to the situation of a single MS.

Techniques:

Journal: EFSA Journal

Article Title: The European Union One Health 2018 Zoonoses Report

doi: 10.2903/j.efsa.2019.5926

Figure Lengend Snippet: Distribution of reported cases of human salmonellosis acquired in the EU, 2016–2018, by the six most frequent serovars in 2018

Article Snippet: However, in 2018, for the first time, S . Infantis was the second serovar isolate from breeding Gallus gallus in the context of NCP, although this finding was markedly related to the situation of a single MS.

Techniques:

Journal: EFSA Journal

Article Title: The European Union One Health 2018 Zoonoses Report

doi: 10.2903/j.efsa.2019.5926

Figure Lengend Snippet: Sankey diagram of the distribution of the human EU top‐five Salmonella serovars, across different food and animal sources (broiler, cattle, pig, turkey and layers), EU , 2018 The left side of the diagram shows the five commonest reported Salmonella serovars from human salmonellosis cases acquired in the EU: S . Infantis (blue), S . Typhimurium (green), S . Enteritidis (pink), monophasic S . Typhimurium (yellow) and S . Derby (violet). Animal and food data from the same source were merged: ‘broiler’ includes isolates from broiler flocks and broiler meat, ‘cattle’ includes isolates from bovines for meat production and bovine meat, ‘pig’ includes isolates from fattening pigs and pig meat, ‘turkey’ includes isolates from fattening turkey flocks and turkey meat and ‘layers’ includes laying hen flocks and eggs. The right side shows the five sources considered (broiler, cattle, pig, turkey and layers). The width of the coloured bands linking sources and serovars is proportional to the percentage of isolation of each serovar from each source.

Article Snippet: However, in 2018, for the first time, S . Infantis was the second serovar isolate from breeding Gallus gallus in the context of NCP, although this finding was markedly related to the situation of a single MS.

Techniques: Isolation

Journal: EFSA Journal

Article Title: The European Union One Health 2018 Zoonoses Report

doi: 10.2903/j.efsa.2019.5926

Figure Lengend Snippet: Sankey diagram of the distribution of the human EU top‐five Salmonella serovars found in food and animal matrices by reporting MS s, EU , 2018 The left side of the diagram shows the five commonest reported Salmonella serovars from human salmonellosis cases acquired in the EU: S . Infantis (blue), S . Typhimurium (green), S . Enteritidis (pink), monophasic S . Typhimurium (yellow) and S . Derby (violet). The right side shows the reporting MS. The width of the coloured bands linking MSs and serovars is proportional to the percentage of isolation of each serovar reported from each MS.

Article Snippet: However, in 2018, for the first time, S . Infantis was the second serovar isolate from breeding Gallus gallus in the context of NCP, although this finding was markedly related to the situation of a single MS.

Techniques: Isolation

Journal: Frontiers in Microbiology

Article Title: The Current Landscape of Antibiotic Resistance of Salmonella Infantis in Italy: The Expansion of Extended-Spectrum Beta-Lactamase Producers on a Local Scale

doi: 10.3389/fmicb.2022.812481

Figure Lengend Snippet: Phylogeny of Salmonella Infantis in Italy. Salmonella The maximum likelihood tree was constructed based on alignment of 1,826 concatenated core genome SNPs of 263 S. Infantis genomes. Strains sequenced in this study are marked with a star and three different clusters are highlighted (Cluster I in red, Cluster II in yellow, Cluster III in green).

Article Snippet: Core single-nucleotide polymorphisms (SNPs) of 263 S. Infantis strains were identified in Ridom SeqSphere + software version 6.0.2.

Techniques: Construct

Journal: Nutrients

Article Title: The Effects of Probiotic Supplementation on the Incidence of Diarrhea in Cancer Patients Receiving Radiation Therapy: A Systematic Review with Meta-Analysis and Trial Sequential Analysis of Randomized Controlled Trials

doi: 10.3390/nu11122886

Figure Lengend Snippet: Detailed of the probiotics used.

Article Snippet: Delia , 1.35 × 10 12 CFU , t.i.d. , Oral , The first day of RT until the end of therapy , VSL Pharmaceuticals, Fort Lauderdale, MD, USA , WHO grading , 490 , 245 , 245 , Lactobacillus & Bifidobacterium & Streptococcus , L. casei, L. plantarum, L. acidophilus, and L. delbruekii subsp. Bulgaricus & B. longum, B. breve, B. infantis, S. salivarius , S. salivrius subsp. Thermophilus , Combined , With Bifidobacterium.

Techniques: Probiotics